# DataAnalysisJC

**Repository Path**: wintermydream/DataAnalysisJC

## Basic Information

- **Project Name**: DataAnalysisJC
- **Description**: data analysis journal club code and slides
- **Primary Language**: Unknown
- **License**: Not specified
- **Default Branch**: master
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 0
- **Forks**: 0
- **Created**: 2020-08-05
- **Last Updated**: 2020-12-19

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README

# Data Analysis Journal Club

## t-SNE JC

Carsen Stringer 

[The art of using t-SNE for single-cell transcriptomics](https://www.nature.com/articles/s41467-019-13056-x) by Dmitry Kobak and Philipp Behrens

[slides](https://docs.google.com/presentation/d/1ObV6S6bhaX4MhfuFXqDQDp-o9itGCV_v9OahqyvoSRY/edit?usp=sharing)

demo [notebook](notebooks/tsne_demo.ipynb) without FIt-SNE dependency.

swiss roll [example](notebooks/swiss_roll.ipynb)


## Reduced rank regression

Jan Funke

[demo notebook](reducedRankRegression/Reduced%20Rank%20Regression.ipynb)

see Jan's [original repo](https://github.com/funkey/das_rrr)

## ML Intro (WCC)

Carsen Stringer 

[slides](https://drive.google.com/file/d/1Gdtjy8K95PdM_qpYupLXDloOpj-Iok7U/view?usp=sharing)

[notebook](notebooks/dim_exploration.ipynb)